Articles
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02/28/2011--
02/28/2011
Microbubble formation and pinch-off scaling exponent in flow-focusing devices
We investigate the gas jet breakup and the resulting microbubble formation in
a microfluidic flow-focusing device using ultra high-speed imaging at 1 million
frames/s. In recent experiments [Dollet et al., Phys. Rev. Lett. 100, 034504
(2008)] it was found that in the final stage of the collapse the radius of the
neck scales with time with a 1/3 power-law exponent, which suggested that gas
inertia and the Bernoulli suction effect become important. Here, ultra
high-speed imaging was used to capture the complete bubble contour and quantify
the gas flow through the neck. It revealed that the resulting decrease in
pressure, due to Bernoulli suction, is too low to account for an accelerated
pinch-off. The high temporal resolution images enable us to approach the final
moment of pinch-off to within 1 {\mu}s. We observe that the final moment of
bubble pinch-off is characterized by a scaling exponent of 0.41 +/- 0.01. This
exponent is approximately 2/5, which can be derived, based on the observation
that during the collapse the neck becomes less slender, due to the exclusive
driving through liquid inertia.
Wim van Hoeve
Benjamin Dollet
Michel Versluis
Detlef Lohse
02/25/2022--
02/25/2022
Spatially-Resolved Band Gap and Dielectric Function in 2D Materials from Electron Energy Loss Spectroscopy
The electronic properties of two-dimensional (2D) materials depend
sensitively on the underlying atomic arrangement down to the monolayer level.
Here we present a novel strategy for the determination of the band gap and
complex dielectric function in 2D materials achieving a spatial resolution down
to a few nanometers. This approach is based on machine learning techniques
developed in particle physics and makes possible the automated processing and
interpretation of spectral images from electron energy-loss spectroscopy
(EELS). Individual spectra are classified as a function of the thickness with
$K$-means clustering and then used to train a deep-learning model of the
zero-loss peak background. As a proof-of-concept we assess the band gap and
dielectric function of InSe flakes and polytypic WS$_2$ nanoflowers, and
correlate these electrical properties with the local thickness. Our flexible
approach is generalizable to other nanostructured materials and to
higher-dimensional spectroscopies, and is made available as a new release of
the open-source EELSfitter framework.
Abel Brokkelkamp
Jaco ter Hoeve
Isabel Postmes
Sabrya E. van Heijst
Louis Maduro
Albert V. Davydov
Sergiy Krylyuk
Juan Rojo
Sonia Conesa-Boj
03/01/2011--
03/01/2011
Bubble size prediction in co-flowing streams
In this paper, the size of bubbles formed through the breakup of a gaseous
jet in a co-axial microfluidic device is derived. The gaseous jet surrounded by
a co-flowing liquid stream breaks up into monodisperse microbubbles and the
size of the bubbles is determined by the radius of the inner gas jet and the
bubble formation frequency. We obtain the radius of the gas jet by solving the
Navier-Stokes equations for low Reynolds number flows and by minimization of
the dissipation energy. The prediction of the bubble size is based on the
system's control parameters only, i.e. the inner gas flow rate $Q_i$, the outer
liquid flow rate $Q_o$, and the tube radius $R$. For a very low gas-to-liquid
flow rate ratio ($Q_i / Q_o \rightarrow 0$) the bubble radius scales as $r_b /
R \propto \sqrt{Q_i / Q_o}$, independently of the inner to outer viscosity
ratio $\eta_i/\eta_o$ and of the type of the velocity profile in the gas, which
can be either flat or parabolic, depending on whether high-molecular-weight
surfactants cover the gas-liquid interface or not. However, in the case in
which the gas velocity profiles are parabolic and the viscosity ratio is
sufficiently low, i.e. $\eta_i/\eta_o \ll 1$, the bubble diameter scales as
$r_b \propto (Q_i/Q_o)^\beta$, with $\beta$ smaller than 1/2.
Wim van Hoeve
Benjamin Dollet
José M. Gordillo
Michel Versluis
Detlef Lohse
01/27/2020--
01/27/2020
Conversations with Documents. An Exploration of Document-Centered Assistance
The role of conversational assistants has become more prevalent in helping
people increase their productivity. Document-centered assistance, for example
to help an individual quickly review a document, has seen less significant
progress, even though it has the potential to tremendously increase a user's
productivity. This type of document-centered assistance is the focus of this
paper. Our contributions are three-fold: (1) We first present a survey to
understand the space of document-centered assistance and the capabilities
people expect in this scenario. (2) We investigate the types of queries that
users will pose while seeking assistance with documents, and show that
document-centered questions form the majority of these queries. (3) We present
a set of initial machine learned models that show that (a) we can accurately
detect document-centered questions, and (b) we can build reasonably accurate
models for answering such questions. These positive results are encouraging,
and suggest that even greater results may be attained with continued study of
this interesting and novel problem space. Our findings have implications for
the design of intelligent systems to support task completion via natural
interactions with documents.
Maartje ter Hoeve
Robert Sim
Elnaz Nouri
Adam Fourney
Maarten de Rijke
Ryen W. White
04/06/2022--
04/06/2022
Mitosis domain generalization in histopathology images -- The MIDOG challenge
The density of mitotic figures within tumor tissue is known to be highly
correlated with tumor proliferation and thus is an important marker in tumor
grading. Recognition of mitotic figures by pathologists is known to be subject
to a strong inter-rater bias, which limits the prognostic value.
State-of-the-art deep learning methods can support the expert in this
assessment but are known to strongly deteriorate when applied in a different
clinical environment than was used for training. One decisive component in the
underlying domain shift has been identified as the variability caused by using
different whole slide scanners. The goal of the MICCAI MIDOG 2021 challenge has
been to propose and evaluate methods that counter this domain shift and derive
scanner-agnostic mitosis detection algorithms. The challenge used a training
set of 200 cases, split across four scanning systems. As a test set, an
additional 100 cases split across four scanning systems, including two
previously unseen scanners, were given. The best approaches performed on an
expert level, with the winning algorithm yielding an F_1 score of 0.748 (CI95:
0.704-0.781). In this paper, we evaluate and compare the approaches that were
submitted to the challenge and identify methodological factors contributing to
better performance.
Marc Aubreville
Nikolas Stathonikos
Christof A. Bertram
Robert Klopleisch
Natalie ter Hoeve
Francesco Ciompi
Frauke Wilm
Christian Marzahl
Taryn A. Donovan
Andreas Maier
Jack Breen
Nishant Ravikumar
Youjin Chung
Jinah Park
Ramin Nateghi
Fattaneh Pourakpour
Rutger H. J. Fick
Saima Ben Hadj
Mostafa Jahanifar
Nasir Rajpoot
Jakob Dexl
Thomas Wittenberg
Satoshi Kondo
Maxime W. Lafarge
Viktor H. Koelzer
Jingtang Liang
Yubo Wang
Xi Long
Jingxin Liu
Salar Razavi
April Khademi
Sen Yang
Xiyue Wang
Mitko Veta
Katharina Breininger
08/16/2002--
08/16/2002
Particle motion in electro-magnetic and gravitational pp-waves
We discuss the motion of neutral and charged particles in a plane
electro-magnetic wave and its accompanying gravitational field.
M. Faquir
J. W. van Holten
04/11/2001--
04/11/2001
Superhydrodynamics
We present a covariant and supersymmetric theory of relativistic
hydrodynamics in four-dimensional Minkowski space.
T. S. Nyawelo
J. W. van Holten
S. Groot Nibbelink
05/23/2023--
11/03/2022
Unbinned multivariate observables for global SMEFT analyses from machine learning
Theoretical interpretations of particle physics data, such as the
determination of the Wilson coefficients of the Standard Model Effective Field
Theory (SMEFT), often involve the inference of multiple parameters from a
global dataset. Optimizing such interpretations requires the identification of
observables that exhibit the highest possible sensitivity to the underlying
theory parameters. In this work we develop a flexible open source framework,
ML4EFT, enabling the integration of unbinned multivariate observables into
global SMEFT fits. As compared to traditional measurements, such observables
enhance the sensitivity to the theory parameters by preventing the information
loss incurred when binning in a subset of final-state kinematic variables. Our
strategy combines machine learning regression and classification techniques to
parameterize high-dimensional likelihood ratios, using the Monte Carlo replica
method to estimate and propagate methodological uncertainties. As a proof of
concept we construct unbinned multivariate observables for top-quark pair and
Higgs+$Z$ production at the LHC, demonstrate their impact on the SMEFT
parameter space as compared to binned measurements, and study the improved
constraints associated to multivariate inputs. Since the number of neural
networks to be trained scales quadratically with the number of parameters and
can be fully parallelized, the ML4EFT framework is well-suited to construct
unbinned multivariate observables which depend on up to tens of EFT
coefficients, as required in global fits.
Raquel Gomez Ambrosio
Jaco ter Hoeve
Maeve Madigan
Juan Rojo
Veronica Sanz
08/19/2008--
02/27/2008
Ekedahl-Oort strata in the supersingular locus
We give a description of the individual Ekedahl-Oort strata contained in the
supersingular locus in terms of Deligne-Lusztig varieties, refining a result of
Harashita.
Maarten Hoeve
07/08/2019--
07/01/2019
Do Transformer Attention Heads Provide Transparency in Abstractive Summarization?
Learning algorithms become more powerful, often at the cost of increased
complexity. In response, the demand for algorithms to be transparent is
growing. In NLP tasks, attention distributions learned by attention-based deep
learning models are used to gain insights in the models' behavior. To which
extent is this perspective valid for all NLP tasks? We investigate whether
distributions calculated by different attention heads in a transformer
architecture can be used to improve transparency in the task of abstractive
summarization. To this end, we present both a qualitative and quantitative
analysis to investigate the behavior of the attention heads. We show that some
attention heads indeed specialize towards syntactically and semantically
distinct input. We propose an approach to evaluate to which extent the
Transformer model relies on specifically learned attention distributions. We
also discuss what this implies for using attention distributions as a means of
transparency.
Joris Baan
Maartje ter Hoeve
Marlies van der Wees
Anne Schuth
Maarten de Rijke
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